Availability
PolyA-miner is available at GitHub. Please click here.
Under the terms of the GNU General Public License as published by the Free Software Foundation (version 3 or later) and No Warranty.
Usage
Parameters
Input
PolyA-miner accepts raw 3'seq data in fastq format
Dependency
Data Processing:
fastp, bowtie2 aligner, samtools
Python libraries:
pandas, cython, pybedtools, scipy, sklearn, statsmodels
PolyA-miner will check for key requied packages and install them.