• Introduction
  • Licensing, Availability and Installation
  • Choosing the Right Graphical Model for Genomics Data
    • Poisson Graphical Model for NGS data
    • Gaussian Graphical Model for Expression Arrays
    • Ising Graphical Model for Mutation Data
      • Learning a Lattice Graph from Simulated Data
      • Estimate LUSC Mutation Networks

  • Tuning Parameter Selection: Network Sparsity
    • Stability Selection
    • StARS Selection

  • Visualization and Data Exportation
  • From TCGA Data to Gene Networks
    • mRNA Microarray Data

  • Bibliography

  • Package
    • Package Vignette
    • Package Download